Re: Compile Question with _cpumask_t Error

on 04/08/2011 01:21 Aric Gregson said the following:
> Hello,
> 
> I am running 9.0-CURRENT FreeBSD amd64 from Tue Jul 18 16:18:20 PDT 2011. I 
> am trying to compile an R-project package that is using g++45 to compile and 
> it fails due (apparently) to an error with _cpumask_t as noted below. I have 
> seen some discussions about this that I do not completely understand 
> (http://lists.freebsd.org/pipermail/freebsd-current/2011-June/025092.html). 
> Essentially, I am wondering what the work-around is for this.

A solution for this is to rebuild/reinstall gcc45 first.

> Thanks in advance, Aric
> ----------------------------
> freeenv# R CMD INSTALL ./RBGL_1.29.0.tar
> * installing to library '/usr/local/lib/R/library'
> * installing source package 'RBGL' ...
> untarring boost include tree...
> ** libs
> g++45 -I/usr/local/lib/R/include     -IboostIncl -fpic  -O2 -pipe 
> -Wl,-rpath=/usr/local/lib/gcc45 -fno-strict-aliasing -c bbc.cpp -o bbc.o
> In file included from 
> /usr/local/lib/gcc45/include/c++/backward/hash_set:60:0,
>                   from boostIncl/boost/graph/adjacency_list.hpp:25,
>                   from RBGL.hpp:26,
>                   from bbc.cpp:1:
> /usr/local/lib/gcc45/include/c++/backward/backward_warning.h:28:2: 
> warning: #warning This file includes at least one deprecated or 
> antiquated header which may be removed without further notice at a 
> future date. Please use a non-deprecated interface with equivalent 
> functionality instead. For a listing of replacement headers and 
> interfaces, consult the file backward_warning.h. To disable this
> warning use -Wno-deprecated.
> In file included from 
> /usr/local/lib/gcc45/gcc/x86_64-portbld-freebsd9.0/4.5.4/include-
> fixed/unistd.h:46:0,
>                   from 
> /usr/local/lib/gcc45/include/c+
> +//x86_64-portbld-freebsd9.0/bits/gthr-default.h:42, from 
> /usr/local/lib/gcc45/include/c+
> +//x86_64-portbld-freebsd9.0/bits/gthr.h:162, from 
> /usr/local/lib/gcc45/include/c++/ext/atomicity.h:34,
>                   from 
> /usr/local/lib/gcc45/include/c++/bits/ios_base.h:41,
>                   from /usr/local/lib/gcc45/include/c++/ios:43,
>                   from /usr/local/lib/gcc45/include/c++/ostream:40,
>                   from /usr/local/lib/gcc45/include/c++/iostream:40,
>                   from RBGL.hpp:7,
>                   from bbc.cpp:1:
> /usr/local/lib/gcc45/gcc/x86_64-portbld-freebsd9.0/4.5.4/include-
> fixed/sys/types.h:111:9: 
> error: '__cpumask_t' does not name a type
> *** Error code 1
> 
> Stop in /tmp/Rtmpd52RCc/R.INSTALL7fb40f0b/RBGL/src.
> ERROR: compilation failed for package 'RBGL'
> * removing '/usr/local/lib/R/library/RBGL'
> 
> 
> freeenv# pkg_info | grep boost
> boost-jam-1.45.0    Build tool from the boost.org
> boost-libs-1.45.0_1 Free portable C++ libraries (without Boost.Python)
> boost-python-libs-1.45.0_1 Framework for interfacing Python and C++
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-- 
Andriy Gapon